Simulation Search Results
Filtered by:
- Iones: CAL
| ID ▲ | Temperature (K) ▲▼ | Length (ps) ▲▼ | Area per lipid ▲▼ | OP Quality: total ▲▼ | Form factor quality ▲▼ | Quality: headgroups, tails | Software | Force field | Lipids | Ions | Experimental Data | Actions |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 527 | 313 | 300000 | 62.78 | N/A | N/A |
|
gromacs | ECC-lipids | POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 531 | 298 | 999520 | 61.37 | N/A | N/A |
|
gromacs | ECC-lipids, SPC/E water model, ECC-ions | POPS, POPC | CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD | No | View |
| 534 | 310 | 2000100 | 49.8 | N/A | N/A |
|
gromacs | Slipids with default Amber ions parameters (type C0) | CHOL, POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 538 | 298 | 1000100 | 56.95 | N/A | N/A |
|
gromacs | Slipids | POPG, POPC | CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD | No | View |
| 557 | 350 | 800100 | 64.48 | N/A | N/A |
|
gromacs | Slipids with ECC-scaled ions (Kohagen) | POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 565 | 303 | 100010 | 60.22 | N/A | N/A |
|
gromacs | CHARMM36 | POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 571 | 313 | 300020 | 62.23 | N/A | N/A |
|
gromacs | ECC-lipids | POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 580 | 298 | 200100 | 60.14 | N/A | N/A |
|
gromacs | CHARMM36 | POPS, POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 585 | 298 | 198020 | 57.4 | N/A | N/A |
|
gromacs | Lipid17 | POPG, POPC | CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD, CAL, CLA, SOD | No | View |
| 600 | 320 | 434500 | 64.06 | N/A | N/A |
|
gromacs | CHARMM36 with NBFIX for calcium ions | POPS, POPC | CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD | No | View |
| 603 | 310 | 100010 | 53.45 | N/A | N/A |
|
gromacs | Berger | POPS, POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 604 | 310 | 600100 | 55.02 | N/A | N/A |
|
gromacs | Slipids with ECC-scaled ions (Kohagen) | CHOL, POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 618 | 320 | 436600 | 62.84 | N/A | N/A |
|
gromacs | CHARMM36 with NBFIX for calcium ions | POPS, POPC | CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD, CLA, CAL, SOD | No | View |
| 622 | 313 | 300020 | 63.42 | N/A | N/A |
|
gromacs | ECC-lipids | POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |
| 736 | 303 | 516080 | 63.39 | N/A | N/A |
|
openMM | Charmm-Drude polarizable; system has been equilibriated using Charmm36 | POPC | CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA, CAL, CLA | No | View |