Trajectory 907

Order parameters quality = N/A

Computational methods Simulation metadata
System PAPC 16:0 Deu
Author(s) Mahmoud Moqadam / mahmoud.moqadam@uib.no
Date 23/03/2026
DOI 10.5281/zenodo.18471806
Publication N/A
Force field CHARMM36m
Simulation length (ps) 500000.0014907
Trajectory size 16147400276
Pre-equilibration time 150
Time left out 0
Temperature (K) 303.15
Number of particles 53818
Software NAMD
Ions POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9), POT(9), CLA(9)
Water TIP3
Lipids - L1 PAPC (100)
Lipids - L2 PAPC (100)
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Lower leaflet

Lipids


PAPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters PAPC

Download JSON main

Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4 nm
Area per lipid : 69.6 Å2