Trajectory 566

Order parameters quality = N/A

Computational methods Simulation metadata
System 120POPC_8CHOL_3968SOL_303K
Author(s) Jesper J Madsen
Date 03/01/2022
DOI 10.5281/zenodo.3870998
Publication N/A
Force field Lipid14
Simulation length (ps) 200100
Trajectory size 211099824
Pre-equilibration time 0
Time left out 0
Temperature (K) 303
Number of particles 28576
Software gromacs
Ions N/A
Water WAT
Lipids - L1 POPC:CHOL (73:4)
Lipids - L2 POPC:CHOL (47:4)
Files View on GitHub main
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 Link to simulation files
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Lower leaflet

Lipids


CHOL
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters CHOL

Download JSON main

Group tail

Order Parameters POPC

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Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.3 nm
Area per lipid : 61.3 Å2