Trajectory 383

Order parameters quality = N/A

Computational methods Simulation metadata
System 200POPC_9000SOL_73CAL_146CLA_310K
Author(s) Nencini, Ricky
Date 04/10/2021
DOI 10.5281/zenodo.2562079
Publication N/A
Force field ECC-CHARMM36
Simulation length (ps) 614000
Trajectory size 1228351760
Pre-equilibration time 0
Time left out 0
Temperature (K) 310.15
Number of particles 54019
Software gromacs
Ions CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146), CAL(73), CLA(146)
Water SOL
Lipids - L1 POPC (100)
Lipids - L2 POPC (100)
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Lower leaflet

Lipids


POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters POPC

Download JSON main

Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.6 nm
Area per lipid : 56.6 Å2