Trajectory 327

Order parameters quality = N/A

Computational methods Simulation metadata
System 52POPC_76CHOL_6400SOL_310K
Author(s) Javanainen, Matti; Kulig, Waldemar
Date 17/01/2022
DOI 10.5281/zenodo.3252052
Publication 10.1101/2020.11.09.374850; 10.1039/C6CP04883H; 10.1021/acs.jpcb.5b04878
Force field MacRog
Simulation length (ps) 200100
Trajectory size 232169876
Pre-equilibration time 200
Time left out 0
Temperature (K) 310
Number of particles 31792
Software gromacs
Ions N/A
Water SOL
Lipids - L1 POPC:CHOL (26:38)
Lipids - L2 POPC:CHOL (26:38)
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Upper leaflet
Lower leaflet

Lipids


CHOL
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters CHOL

Download JSON main

Group tail

Order Parameters POPC

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Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.2 nm
Area per lipid : 41 Å2