Trajectory 183

Order parameters quality = N/A

Computational methods Simulation metadata
System 9.4%DOGinSDPEwithLipid17
Author(s) Saara Lautala and Suvi Heinonen
Date 19/08/2022
DOI 10.5281/zenodo.6778161
Publication doi.org/10.1016/j.bbamem.2022.183961
Force field Lipid17
Simulation length (ps) 2100020
Trajectory size 13993891124
Pre-equilibration time 20
Time left out 100
Temperature (K) 310
Number of particles 36020
Software gromacs
Ions N/A
Water SOL
Lipids - L1 SDPE:DOG (58:6)
Lipids - L2 SDPE:DOG (58:6)
Files View on GitHub main
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 Link to simulation files
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Lower leaflet

Lipids


SDPE
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
DOG
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters SDPE

Data not yet available main — contribute this data to BilayerData

No OP Data Available for SDPE

Order Parameters DOG

Download JSON main

Group sn-1

Group sn-2

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.5 nm
Area per lipid : 59.9 Å2