Trajectory 162

Order parameters quality = N/A

Computational methods Simulation metadata
System 512POPC_24928SOL_440CAL_880CLA_313K
Author(s) Nencini, Ricky
Date 17/02/2022
DOI 10.5281/zenodo.3434100
Publication N/A
Force field ECC-lipids
Simulation length (ps) 1291840
Trajectory size 35098056096
Pre-equilibration time 0
Time left out 0
Temperature (K) 313
Number of particles 144712
Software gromacs
Ions CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880), CAL(440), CLA(880)
Water SOL
Lipids - L1 POPC (256)
Lipids - L2 POPC (256)
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Upper leaflet
Lower leaflet

Lipids


POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters POPC

Download JSON main

Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.3 nm
Area per lipid : 61.8 Å2