Trajectory 140

Order parameters quality = N/A

Computational methods Simulation metadata
System 102POPC_26POPS_26SOD_4290SOL_310K_Berger
Author(s) Ollila O. H. Samuli
Date 24/03/2022
DOI 10.5281/zenodo.1475285
Publication N/A
Force field Berger
Simulation length (ps) 80004
Trajectory size 1463959460
Pre-equilibration time 40
Time left out 0
Temperature (K) 310
Number of particles 19630
Software gromacs
Ions SOD(26)
Water SOL
Lipids - L1 POPC:POPS (51:13)
Lipids - L2 POPC:POPS (51:13)
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 Link to simulation files
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Lower leaflet

Lipids


POPS
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters POPS

Download JSON main

Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Order Parameters POPC

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Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.8 nm
Area per lipid : 56.3 Å2