Trajectory 118

Order parameters quality = N/A

Computational methods Simulation metadata
System 154CHOL_358POPC_21183SOL_298K
Author(s) Favela-Rosales, Fernando
Date 01/11/2021
DOI 10.5281/zenodo.62026
Publication N/A
Force field Slipids
Simulation length (ps) 100100
Trajectory size 458213532
Pre-equilibration time 70
Time left out 0
Temperature (K) 298
Number of particles 122917
Software gromacs
Ions N/A
Water SOL
Lipids - L1 CHOL:POPC (76:179)
Lipids - L2 CHOL:POPC (78:179)
Files View on GitHub main
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 Link to simulation files
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Upper leaflet
Lower leaflet

Lipids


CHOL
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters CHOL

Download JSON main

Group tail

Order Parameters POPC

Download JSON main

Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.7 nm
Area per lipid : 46.9 Å2