Trajectory 904

Order parameters quality = 0.3618

Computational methods Simulation metadata
System SDPC18:0(d35)/22:5n6PC)
Author(s) Mahmoud Moqadam / mahmoud.moqadam@uib.no
Date 17/03/2026
DOI 10.5281/zenodo.18470730
Publication N/A
Force field CHARMM36m
Simulation length (ps) 500000.0014907
Trajectory size 17282000276
Pre-equilibration time 150
Time left out 0
Temperature (K) 303.15
Number of particles 57600
Software NAMD
Ions N/A
Water TIP3
Lipids - L1 SD5PC (100)
Lipids - L2 SD5PC (100)
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Lipids


SD5PC
  • Quality total: 0.3618
  • Quality headgroups: N/A
  • Quality tails: 0.3618
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Related experiments:

Article DOI Internal ID Type Temperature Actions
10.1021/ja029029o 10.1021/ja029029o/2 OP 303.15 View

Order Parameters SD5PC

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Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : 0.3618
OP Quality of headgroups: 0
OP Quality of tails: 0.1809
FF Quality: N/A

Bilayer thickness : 4.3 nm
Area per lipid : 69.4 Å2