Trajectory 847

Order parameters quality = N/A

Computational methods Simulation metadata
System POPC/SM16/ERG(35:35:30)
Author(s) fernando.fr@zacatecasocc.tecnm.mx
Date 07/12/2025
DOI 10.5281/zenodo.17730735
Publication N/A
Force field Slipids
Simulation length (ps) 100020
Trajectory size 4164730004
Pre-equilibration time 300000
Time left out 0
Temperature (K) 295
Number of particles 222656
Software gromacs
Ions N/A
Water SOL
Lipids - L1 ERG:POPC:SM16 (152:180:176)
Lipids - L2 ERG:POPC:SM16 (152:180:176)
Files View on GitHub main
 Download PDB File
 Link to simulation files
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Upper leaflet
Lower leaflet

Lipids


ERG
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
SM16
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters ERG

Download JSON main

Group tail

Order Parameters POPC

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Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Order Parameters SM16

Download JSON main

Group fa

Group headgroup

Group sphingosine

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 5 nm
Area per lipid : 42.9 Å2