Trajectory 567
Order parameters quality = N/A
| Computational methods | Simulation metadata |
|---|---|
| System | 1152DPPC_46440SOL_124SOD_124CLA_310K |
| Author(s) | Javanainen, Matti; Martinez-Seara, Hector; Vattulainen, Ilpo |
| Date | 22/12/2021 |
| DOI | 10.5281/zenodo.439080 |
| Publication | 10.1038/s41598-017-01247-9 |
| Force field | Slipids |
| Simulation length (ps) | 300100 |
| Trajectory size | 3242665028 |
| Pre-equilibration time | 0 |
| Time left out | 0 |
| Temperature (K) | 310 |
| Number of particles | 289328 |
| Software | gromacs |
| Ions | SOD(124), CLA(124) |
| Water | SOL |
| Lipids - L1 | DPPC (576) |
| Lipids - L2 | DPPC (576) |
| Files |
View on GitHub main Download PDB File Link to simulation files |
Hover over a component to view composition data.
Upper leaflet
Lower leaflet
Lipids
DPPC
- Quality total: N/A
- Quality headgroups: N/A
- Quality tails: N/A
Related experiments:
| Article DOI | Internal ID | Type | Temperature | Actions |
|---|
Order Parameters DPPC
Download JSON mainGroup sn-1
Group sn-2
Group headgroup
Group glycerol backbone
Area per lipid
Form Factor
Experimental and Molecular Dynamics based descriptors
Quality of Order Parameters :
N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A
Bilayer thickness :
4.3 nm
Area per lipid : 60 Å2
Area per lipid : 60 Å2